Posts tonen met het label ALI. Alle posts tonen
Posts tonen met het label ALI. Alle posts tonen

maandag 2 november 2020

Pathogenesis and structure of SARS-CoV-2 and therapeutic options for COVID-19: a research collection

Coagulopathy characterizing COVID-19
The unique characteristics of COVID-19 coagulopathy, Critical Care 2020; 24: 360;

IL-6 and central cytokine storms are not characteristic for COVID-19

Severe COVID-19 Infections- Knowledge gained and remaining questions, JAMA Internal Medicine, 18 September 2020;

Immune profile

Doctors may have found a new way to predict and treat severe coronavirus cases (IL-7 to treat severe COVID-19), BGR Science, May 31, 2020;

Pathogenesis and viral tropism of SARS-Coronaviruses
Role of SARS-CoV Viroporins E, 3a and 8a in Replication and Pathogenesis, mBio 2018 May-Jun; 9(3);
Secondary structure of the SARS-CoV-2 5'-UTR, RNA Biology 2020:1-10;
SARS-CoV-2 uses a second doorway into cells: Neuropilin-1 facilitates SARS-CoV-2 cell entry and infectivity, Science 20 October 2020;
The SARS-coronavirus papain-like protease: Structure, function and inhibition by designed antiviral compounds, Antiviral Research 2015 Mar;115:21-38;
Molecular epidemiology, evolution and phylogeny of SARS-coronavirus, Infection, Genetics and Evolution 2019 Jul;71:21-30;
SARS-CoV-2 ORF3b is a Potent Interferon Antagonist whose activity is increased by a naturally occurring elongation variant, Cell Reports 2020 Sep 22;32(12);
Cardiovascular Implications of Fatal Outcomes of Patients with COVID-19, JAMA Cardiology 2020 Jul; 5(7): 1-8;
Outcomes of Cardiovascular MRI in Patients Recently discovered from COVID-19, JAMA Cardiology 2020, 27 July 2020;
Patient-derived SARS-CoV-2 mutations impact viral replication dynamics and infectivity in vitro and with clinical implications in vivo, Cell discovery 2020;6:76;
Lung tissue in fatal COVID-19 shows broad cell tropism and extensive damage, News Medical Life Sciences, September 30, 2020;
The Natural History, Pathobiology and Clinical Manifestations of SARS-CoV-2 Infections, Journal of Neuroimmune Pharmacology 2020 Jul 21: 1-28;
The PDZ-Binding Motif of SARS-Coronavirus envelope protein is a determinant of viral pathogenesis, PLoS Pathogens 2014 Aug; 10(8);
In silico identification of Tretinoin as a SARS-CoV-2 envelope (E) protein ion channel inhibitor, Computers in Biology and Medicine 2020 Dec; 127: 104063;
SARS-CoV-2 strategically mimics proteolytic activation of human ENaC, eLife Sciences 2020;9;
Dying with SARS-CoV-2 infection-- an autopsy study of the first consecutive 80 cases in Hamburg, Germany, International Journal of Legal Medicine 2020 Jun 4: 1-10;

Possible treatment options for COVID-19
Kallikrein-kinin blockade in patients with COVID-19 to prevent Acute Respiratory Syndrome, eLife 2020; 9;
Mechanisms of Protective Effects of SGLT2 Inhibitors in Cardiovascular Disease and Renal Dysfunction, Current topics in medicinal chemistry 2019;19(20): 1818-1849;
Outcomes Associated with use of a Kinin B2 Receptor Antagonist among patients with COVID-19, JAMA Infectious Diseases 2020;3(8);
Abelson Kinase Inhibitors Are Potent Inhibitors of SARS-CoV and MERS-CoV Fusion, Journal of Virology 2016 Oct 1; 90(19):8924-8933;
Salvia miltiorrhiza Injection alleviates LPS-induced Acute Lung Injury by adjusting the balance of MMPs/TIMPs ratio, Evidence Based Complement Alternative Medicine 2020;2020;
Sonic Hedgehog Signaling: Evidence for its Protective Role in Endotoxin Induced ALI in mouse model, PLoS One 2015; 10(11);
Extracorporeal membrane oxygenation for SARS associated with COVID-19: a retrospective cohort study, Lancet Respiratory Medicine Vol. 8, Issue 11, November 01, 2020;
Novel hybrid antiviral VTRRT-13V2.1 against SARS-CoV-2 main protease: retro-combinatorial synthesis and molecular dynamics analysis, Heliyon Vol. 6, Issue 10, October 2020;
A perspective on Erythropoietin as a potential adjuvant therapy for ALI/ARDS in patients with COVID-19, Archives of Medical Research 2020 Aug 11;
Association between chronic ACE receptor inhibitor exposure and decreased odds of severe disease in patients with COVID-19, Anatolian Journal of Cardiology 2020; 24(1): 21-29;
Vorolanib and everolimus: Lenvatinib and everolimus part deux, or something new?, EBioMedicine Vol. 56, June 2020;
MMP-8 Inactivates Macrophage Inflammatory Protein-1alpha to Reduce Acute Lung Inflammation and Injury in Mice, Journal of Immunology 2010 Feb 1;184(3): 1575-1588;
Sofosbuvir for COVID-19 infection: a potential candidate, Indian Journal of Pharmacology 2020 May-Jun; 52(3): 232-233;
Broad spectrum coronavirus antiviral drug discovery, Expert Opin Drug Discovery 2019; 14(4): 397-412;
Apirin Use is Associated with Decreased Mechanical Ventilation, ICU Admission, and In-Hospital Mortality in Hospitalized Patients with COVID-19, Anesthesia & Analgesia: October 21, 2020;
Is Acetylsalicylic Acid a Safe and Potentially Useful Choice for Adult Patients with COVID-19?, Drugs 80, 1383-1396(2020);
Ac2-26 mimetic peptide of annexin A1 to treat severe COVID-19: A hyptothesis, Medical Hypotheses 2020 Dec; 145: 110352;
Umbilical cord: an allogenic tissue for potential treatment of COVID-19,
Ebselen, Disulfirum, Carmofur, PX-12, Tideglusib and Shikonin are nonspecific promiscious SARS-CoV-2 main protease inhibitors, ACS Pharmacological Translational Sciences 2020 Oct 9;

Preprints (warning: never draw conclusions based on MedRxiv and BioRxiv research papers: preprints
from the Rxiv server still have to undergo peer review, conclusions are preliminary and might turn out to be invalid)
Ethacridine inhibits SARS-CoV-2 by inactivating viral particles in cellular models, October 28, 2020;
A neutrophil activation signature predicts critical illness and mortality in COVID-19, September 02, 2020;

maandag 19 oktober 2020

Extensive reading recommendations on SARS-CoV-2/COVID-19: all mechanisms involved (Part 6)


Factors involved in SARS-CoV-2/COVID-19

Activated endothelium as a source of Acute Lung Injury (ALI)/ARDS
Angiopoietin-2, permeability oedema, occurrence and severity of ALI/ARDS in septic and non-septic critically ill patients, BMJ Thorax Journal Vol 63, Issue 10, October 2008;
Endothelial biomarkers in human sepsis: pathogenesis and prognosis for ARDS
, Pulmonary Circulation 2018 Apr-Jun; 8(2);

Acute Lung Injury (ALI)
A Perspective on Erythropoietin as a Potential Adjuvant Therapy for Acute Lung Injury (ALI)/ARDS in Patients with COVID-19, Archives of Medical Research 2020, Aug 11;

Coagulation
Thromboinflammation and the hypercoagulability of COVID-19, Journal of Thrombosis and Haemostasis, 13 April 2020;

Embolism
Pulmonary embolism in COVID-19 patients: a French multicentre cohort study, European Heart Journal Vol. 41, Issue 32, 21 August 2020, p3058-3068;

Hypoxia and HIF as a link between sepsis and thrombosis
Hypoxia and HIF activation as a possible link between sepsis and thrombosis, Thrombosis Journal 2019; 17: 16;
The stimulation of thrombosis by hypoxia, Thrombosis Research Vol. 181, p77-83, September 01, 2019;
Hypoxia response and acute lung and kidney injury: possible implications for therapy of COVID-19, Clinical Kidney Journal 2020 Aug; 13(4): 494-499;
Innate immunity during SARS-CoV-2: evasion strategies and activation trigger hypoxia and vascular damage, Clinical and Experimental Immunology, Journal of Translational Immunology, 26 September 2020;
COVID-19: hemoglobin, iron and hypoxia beyond inflammation: A narrative review, Clinics and Practice 2020 May 19; 10(2): 1271;
miRNAs regulate the HIF switch during hypoxia: a novel therapeutic target, Angiogenesis 2018; 21(2): 183-202;

Hypoxia and Reactive Oxygen Species (ROS) (oxidative stress)
Keeping the engine primed: HIF factors as key regulators of cardiac metabolism and angiogenesis during ischemia, Journal of Molecular Medicine 2007 Dec;85(12):1309-15;
Role of oxidative stress and NFkB in hypoxia-induced pulmonary edema (curcumin as a NFkB blocker attenuates hypoxia-induced edema), Experimental Biology and Medicine Vol. 233, Issue 9, 2008;

Pathogenesis and structure of SARS-CoV-2
Does the pathogenesis of SARS-CoV-2 decrease at high-altitude?, Respiratory Physiology & Neurobiology Vol. 277, June 2020;
Mechanisms of Coronavirus Cell Entry Mediated by the Viral Spike Protein, MDPI Viruses 2012 Jun;4(6): 1011-1033;
Structure, Function and Evolution of Coronavirus Spike Proteins, Annual Reviews Virology 2016 Sep 29; 3(1): 237-261;
Cleavage of the SARS Coronavirus Spike Glycoprotein by Airway Proteases Enhances Virus Entry into Human Bronchial Epithelial Cells in Vitro, PLoS 2009; 4(11): e7870;

Pattern Recognition Receptors, Interferon pathways and cytokine cascades
Innate immunity during SARS-CoV-2: evasion strategies and activation trigger hypoxia and vascular damage, Clinical and Experimental Immunology, Journal of Translational Immunology, 26 September 2020;

Pulmonary vascular (right ventricular) consequences of COVID-19

Novel insights on the pulmonary vascular consequences of COVID-19, Lung Cellular and Molecular Physiology 2020 Aug 1; 319(2): L277-288;

Sepsis
Sepsis and septic shock: endothelial molecular pathogenesis associated with vascular thrombotic disease, Thrombosis Journal 2019; 17: 10;
Endothelial biomarkers in human sepsis: pathogenesis and prognosis for ARDS, Pulmonary Circulation 2018 Apr-Jun; 8(2);

Therapeutics and possible treatment options for COVID-19

Oxytocin as a Potential Adjuvant against COVID-19 Infection, Endocrine, Metabolic & Immune Disorders Drug Targets 2020, Sep 10;
Prophylactic efficacy of Quercetin in ameliorating the hypoxia induced vascular leakage in lungs of rats, PLoS One 2019; 14(6);
Nifedipine inhibits hypoxia induced transvascular leakage through downregulation of NFkB, Respiratory Physiology & Neurobiology Vol. 183, Issue 1, 31 July 2012, p26-34;